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We went through the protocols across all the pcaps on pcapr and these are the ones that we don't have a sample capture for. The community would greatly benefit if you can upload a pcap that has one or more of these protocols.

3com Network Jack
AAL type 2 signalling protocol (Q.2630)
ACP133 Attribute Syntaxes
Ad hoc On-demand Distance Vector Routing Protocol
Adaptive Multi-Rate
AgentX
AIM Administrative
AIM Buddylist Service
AIM Generic Service
AIM ICQ
AIM Location
AIM Messaging
AIM Privacy Management Service
AIM Server Side Info
AIM Server Side Themes
AIM Signon
AIM User Lookup
Airopeek encapsulated IEEE 802.11
Alert Standard Forum
Alteon - Transparent Proxy Cache Protocol
AMS
ANSI A-I/F BSMAP
ANSI IS-637-A (SMS) Teleservice Layer
ANSI IS-637-A (SMS) Transport Layer
ANSI IS-683 (OTA (Mobile))
ANSI IS-801 (Location Services (PLD))
ANSI Mobile Application Part
ANSI Transaction Capabilities Application Part
Anything in Anything Protocol
Application Configuration Access Protocol
Architecture for Control Networks
Art-Net
Async data over ISDN (V.120)
Asynchronous Layered Coding
ATM PW, N-to-one Cell Mode Control Word
AudioCodes TPNCP (TrunkPack Network Control Protocol)
AudioCodes Trunk Trace
AVS WLAN Capture header
Banyan Vines IP
Base Station Subsystem GPRS Protocol
BCTP Q.1990
BEA Tuxedo
Bi-directional Fault Detection Control Message
Blocks Extensible Exchange Protocol
Bluetooth HCI
Bluetooth HCI ACL Packet
Bluetooth HCI Command
Bluetooth HCI Event
Bluetooth HCI H4
Bluetooth HCI SCO Packet
Bluetooth L2CAP Packet
Bluetooth RFCOMM Packet
Bluetooth SDP
Boardwalk
BSS LCS Assistance Protocol
Call Specification Language (Xcsl)
Camel
Canon BJNP
Catapult DCT2000 packet
CCSDS
CDS Clerk Server Calls
Certificate Management Protocol
Certificate Request Message Format
CESoPSN basic NxDS0 mode (no RTP support)
CFM EOAM 802.1ag/ITU Protocol
Charging ASE
Checkpoint FW-1
China Mobile Point to Point Protocol
Cisco Auto-RP
Cisco Group Management Protocol
Cisco Session Management
Cisco Wireless IDS Captures
Cisco Wireless Layer 2
Clearcase NFS
Cluster TDB
Common Image Generator Interface
Compressed Data Type
Compuserve GIF
Computer Interface to Message Distribution
CoSine IPNOS L2 debug output
Cross Point Frame Injector
CRTP
CSM_ENCAPS
Data
Datagram Congestion Control Protocol
Datagram Transport Layer Security
DCE DFS Basic Overseer Server
DCE DFS File Exporter
DCE DFS Fileset Location Server
DCE DFS FLDB UBIK TRANSFER
DCE DFS FLDB UBIKVOTE
DCE DFS ICL RPC
DCE DFS Replication Server
DCE DFS Token Server
DCE Distributed Time Service Local Server
DCE Distributed Time Service Provider
DCE Name Service
DCE Security ID Mapper
DCE/DFS BUDB
DCE/RPC BUTC
DCE/RPC CDS Solicitation
DCE/RPC Conversation Manager
DCE/RPC Directory Acl Interface
DCE/RPC Kerberos V
DCE/RPC NCS 1.5.1 Local Location Broker
DCE/RPC Operations between registry server replicas
DCE/RPC Prop Attr
DCE/RPC Registry Password Management
DCE/RPC Registry Server Attributes Schema
DCE/RPC Registry server propagation interface - ACLs.
DCE/RPC Registry server propagation interface - PGO items
DCE/RPC Registry server propagation interface - properties and policies
DCE/RPC Remote Management
DCE/RPC Repserver Calls
DCE/RPC RS_ACCT
DCE/RPC RS_BIND
DCE/RPC RS_MISC
DCE/RPC RS_PROP_ACCT
DCE/RPC RS_UNIX
DCE/RPC UpServer
DCOM IDispatch
DCOM IRemoteActivation
DCOM OXID Resolver
DCP Application Framing Layer
DCP Protection, Fragmentation & Transport Layer
DCP Tag Packet Layer
DEC DNA Routing Protocol
DEC Spanning Tree Protocol
DeskTop PassThrough Protocol
DFS Calls
DG Gryphon Protocol
DHCP Failover
Diameter 3GPP
DICOM
Digital Audio Access Protocol
Digital Private Signalling System No 1
Digital Private Signalling System No 1 Link Layer
Direct Message Profile
DirectPlay Protocol
Distcc Distributed Compiler
Distributed Checksum Clearinghouse protocol
Distributed Lock Manager
DNS Control Program Server
DOCSIS Appendix C TLV's
DOCSIS Baseline Privacy Key Management Attributes
DOCSIS Baseline Privacy Key Management Request
DOCSIS Baseline Privacy Key Management Response
DOCSIS Downstream Channel Change Acknowledge
DOCSIS Downstream Channel Change Request
DOCSIS Downstream Channel Change Response
DOCSIS Downstream Channel Descriptor
DOCSIS Dynamic Service Addition Acknowledge
DOCSIS Dynamic Service Addition Request
DOCSIS Dynamic Service Addition Response
DOCSIS Dynamic Service Change Acknowledgement
DOCSIS Dynamic Service Change Request
DOCSIS Dynamic Service Change Response
DOCSIS Dynamic Service Delete Request
DOCSIS Dynamic Service Delete Response
DOCSIS Initial Ranging Message
DOCSIS Mac Domain Description
DOCSIS Mac Management
DOCSIS Range Request Message
DOCSIS Ranging Response
DOCSIS Registration Acknowledge
DOCSIS Registration Request Multipart
DOCSIS Registration Requests
DOCSIS Registration Response Multipart
DOCSIS Registration Responses
DOCSIS Synchronisation Message
DOCSIS Upstream Bandwidth Allocation
DOCSIS Upstream Channel Change Request
DOCSIS Upstream Channel Change Response
DOCSIS Upstream Channel Descriptor
DOCSIS Upstream Channel Descriptor Type 29
DOCSIS Vendor Specific Encodings
DPNSS/DASS2-User Adaptation Layer
Dynamic DNS Tools Protocol
E100 Encapsulation
EFS (pidl)
EHS
Enhanced Variable Rate Codec
EtherCAT frame header
EtherCAT Mailbox Protocol
Etheric
Ethernet over IP
ETHERNET Powerlink V1.0
ETSI Distribution & Communication Protocol (for DRM)
EUTRAN X2 Application Protocol (X2AP)
Event Logger
Event Notification for Resource Lists (RFC 4662)
Exchange 2003 Directory Request For Response
Exchange 5.5 EMSMDB
Extended Security Services
Extensible Record Format
Far End Failure Detection
FC Extended Link Svc
FCoE Initialization Protocol
Fibre Channel Fabric Zone Server
Fibre Channel Security Protocol
Fibre Channel Single Byte Command
File Mapping Protocol
File Mapping Protocol Nofity
Financial Information eXchange Protocol
Flow
FP
Frame
FTServer Operations
G.723
GARP Multicast Registration Protocol
giFT Internet File Transfer
GPEF
GPRS Network service
GPRS Tunneling Protocol V2
GSM A-I/F BSSMAP
GSM A-I/F COMMON
GSM A-I/F DTAP
GSM A-I/F GPRS Mobility and Session Management
GSM A-I/F RP
GSM CCCH
GSM Mobile Application
GSM SACCH
GSM Short Message Service User Data
GSM SMS TPDU (GSM 03.40)
GSM Um Interface
GSM_SS
GSS-API Generic Security Service Application Program Interface
H.248 3GPP
H.248 Annex C
H.248 Annex E
H.248 Q.1950 Annex A
H.248.10
H.248.7
H.282 Remote Device Control
H.283 Logical Channel Transport
H.323
H.324/CCSRL
H.324/SRP
H.450 Remote Operations Apdus
H.450 Supplementary Services
H.460 Supplementary Services
H.501 Mobility
H235-SECURITY-MESSAGES
HDLC PW, FR port mode (no CW)
Hilscher analyzer dissector
HP Remote Maintenance Protocol
HP-UX Network Tracing and Logging
Hummingbird NFS Daemon
HyperSCSI
ICBAAccoCallback
ICBAAccoMgt
ICBAAccoServer
ICBABrowse
ICBAPhysicalDevice
IEEE 802.11 wireless LAN aggregate frame
IEEE 802.11 wireless LAN management frame
IEEE 802.1ad
IEEE 802.1ah
IEEE C37.118 Synchrophasor Protocol
IEEE802a OUI Extended Ethertype
iFCP
InfiniBand
Init shutdown service
Intelligent Network Application Protocol
Intelligent Platform Management Interface
Intelligent Platform Management Interface (Session Wrapper)
Inter-Access-Point Protocol
Inter-Asterisk eXchange v2
Inter-Integrated Circuit
Interbase
Internal TDM
Internet Cache Protocol
Internet Communications Engine Protocol
Internet Content Adaptation Protocol
Internet Group membership Authentication Protocol
Internet Message Access Protocol
Internet Printing Protocol
IP Device Control (SS7 over IP)
IP Over FC
IP Virtual Services Sync Daemon
IPX Message
IPX Routing Information Protocol
IPX WAN
IRemUnknown
ISC Object Management API
ISDN
ISMACryp Protocol
iSNS
ISO 8602 CLTP ConnectionLess Transport Protocol
ISUP Thin Protocol
ITU-T E.212 number
ITU-T Recommendation H.223
ITU-T Recommendation H.261
ITU-T Recommendation H.263 RTP Payload header (RFC4629)
iTunes podCast rss elements
IuUP
iWARP Direct Data Placement and Remote Direct Memory Access Protocol
iWARP Marker Protocol data unit Aligned framing
Jabber XML Messaging
Java RMI
JPEG File Interchange Format
K12xx
Kerberized Internet Negotiation of Key
Kerberos Administration
Kerberos v4
Kingfisher
LANforge Traffic Generator
Laplink
Lb-I/F BSSMAP LE
LeCroy VICP
LGE Monitor
Light Weight DNS RESolver (BIND9)
Lightweight User Datagram Protocol
Line Printer Daemon Protocol
Link Access Procedure, Channel Dm (LAPDm)
Link Management Protocol (LMP)
Linux Kernel Packet Generator
Logical-Link Control Basic Format XID
LTE Radio Resource Control (RRC) protocol
Lucent/Ascend debug output
MAC Control
MAC-LTE
MAP_DialoguePDU
Media Server Control Markup Language - draft 07
Memcache Protocol
Mesh Header
Message Session Relay Protocol
Message Transfer Part Level 2
Message Transfer Part Level 3 Management
MIBs
Microsoft Distributed File System
Microsoft Distributed Link Tracking Server Service
Microsoft Exchange New Mail Notification
Microsoft File Replication Service
Microsoft File Replication Service API
Microsoft Network Logon
Microsoft Routing and Remote Access Service
Microsoft Spool Subsystem
Microsoft Telephony API Service
Microsoft Windows Logon Protocol (Old)
MIME Multipart Media Encapsulation
Mobile IP
Mobile IPv6 / Network Mobility
Modbus/TCP
Moving Picture Experts Group Audio
MP4V-ES
MS Proxy Protocol
MSNIP: Multicast Source Notification of Interest Protocol
MTP 2 Transparent Proxy
Multicast Router DISCovery protocol
Multimedia Internet KEYing
Multiprotocol Label Switching Echo
Nasdaq TotalView-ITCH
Nasdaq-SoupTCP version 2.0
NAT Port Mapping Protocol
Negative-acknowledgment Oriented Reliable Multicast
Netdump Protocol
NetScape Certificate Extensions
Network Block Device
Network News Transfer Protocol
Network Service Over IP
Network Status Monitor CallBack Protocol
NFSACL
NFSAUTH
NIS+
NIS+ Callback
Non-Access-Stratum (NAS)PDU
Novell Cluster Services
Novell Distributed Print System
Novell SecretStore Services
Null/Loopback
OMA UserPlane Location Protocol
OpcUa Binary Protocol
Open Policy Service Interface
OpenBSD Encapsulating device
OpenBSD Packet Filter log file
OpenBSD Packet Filter log file, pre 3.4
P_Mul (ACP142)
Packet
Packet Cable Lawful Intercept
PacketCable
PacketCable AVPs
PacketCable Call Content Connection
Packetized Elementary Stream
PacketLogger
Paltalk Messenger Protocol
Parallel Redundancy Protocol (IEC62439 Chapter 6)
Path Computation Element communication Protocol
PC NFS
PDCP-LTE
Pegasus Lightweight Stream Control
PKCS#1
PKCS#12: Personal Information Exchange
PKINIT
PKIX CERT File Format
PKIX Qualified
PKIX Time Stamp Protocol
PKIXProxy (RFC3820)
poc-settings XML doc (RFC 4354)
Port Aggregation Protocol
PPI Packet Header
PPP Bridging Control Protocol
PPP Multilink Protocol
PPP VJ Compression
PPP-over-Ethernet Session
Pragmatic General Multicast
Printer Access Protocol
Privilege Server operations
Pro-MPEG Code of Practice #3 release 2 FEC Protocol
PROFINET DCP
PROFINET IO
PROFINET MRP
PROFINET MRRT
PROFINET PTCP
PROFINET Real-Time Protocol
PW Ethernet Control Word
PW Frame Relay DLCI Control Word
Q.2931
Q.932 Operations Service Element
QSIG
Quake II Network Protocol
Quake III Arena Network Protocol
Quake Network Protocol
QuakeWorld Network Protocol
Qualified Logical Link Control
Radio Resource Control (RRC) protocol
Radio Resource LCS Protocol (RRLP)
Radio Signalling Link (RSL)
Real Data Transport
Real-Time Media Access Control
Real-Time Publish-Subscribe Wire Protocol
Redback
Redundant Link Management Protocol
Registry server administration operations
Registry Server Attributes Manipulation Interface
Reliable UDP
Remote Device Management
Remote Management Control Protocol
Remote Override interface
Remote Packet Capture
Remote sec_login preauth interface
Remote Shell
Remote Wall protocol
Retix Spanning Tree Protocol
RFC 2250 MPEG1
RFC 2435 JPEG
RFC 2833 RTP Event
RLC-LTE
RMCP Security-extensions Protocol
Roofnet Protocol
Router-port Group Management Protocol
RPC Browser
RS Interface properties
RSTAT
RTcfg
S1 Application Protocol
SADMIND
SAToP (no RTP support)
Scripting Service Protocol
SCSI_MMC
SCSI_OSD
SCSI_SBC
SCSI_SMC
SCSI_SSC
SEBEK - Kernel Data Capture
SERCOS III V1.1
Serial Infrared
Service Advertisement Protocol
Session Announcement Protocol
Session Initiation Protocol (SIP as raw text)
Settings for Microsoft Distributed File System
Short Message Relaying Service
Signaling Compression
SIMULCRYPT Protocol
Sipfrag
SNMP Multiplex Protocol
Societe Internationale de Telecommunications Aeronautiques
SoulSeek Protocol
SPRAY
SSCF-NNI
SSCOP
Synchronous Data Link Control (SDLC)
T.30
T.38
TACACS
Tazmen Sniffer Protocol
Teamspeak2 Protocol
TEI Management Procedure, Channel D (LAPD)
Telkonet powerline
The Armagetron Advanced OpenGL Tron clone
Time Synchronization Protocol
Transport Adapter Layer Interface v1.0, RFC 3094
TTEthernet Protocol Control Frame
Turbocell Aggregate Data
Turbocell Header
TURN Channel
TwinCAT IO-RAW
TwinCAT NV
UNISTIM Protocol
Unisys Transmittal System
Universal Mobile Telecommunications System (UMTS) Radio Resource Control (RRC) protocol
Universal Mobile Telecommunications System (UMTS) Radio Resource Control (RRC) protocol Information element
Universal Mobile Telecommunications System (UMTS) Radio Resource Control (RRC) protocol PDU definitions
USB
USB Mass Storage
UTRAN Iub interface NBAP signalling
UTRAN IuBC interface SABP signaling
UTRAN Iupc interface Positioning Calculation Application Part (PCAP)
UTRAN Iur interface Radio Network Subsystem Application Part
V5.2-User Adaptation Layer
VCDU
WAP Session Initiation Request
Wave Short Message Protocol(IEEE P1609.3)
Web Cache Coordination Protocol
WebSphere MQ Programmable Command Formats
Wellfleet Compression
Wellfleet HDLC
WiMax AAS-FEEDBACK/BEAM Messages
WiMax AAS-FEEDBACK/BEAM Messages
WiMax ARQ Feedback/Discard/Reset Messages
WiMax ARQ Feedback/Discard/Reset Messages
WiMax CLK-CMP Message
WiMax CLK-CMP Message
WiMax DCD/UCD Messages
WiMax DCD/UCD Messages
WiMax DLMAP/ULMAP Messages
WiMax DLMAP/ULMAP Messages
WiMax DREG-REQ/CMD Messages
WiMax DREG-REQ/CMD Messages
WiMax DSA/C/D Messages
WiMax DSA/C/D Messages
WiMax DSX-RVD Message
WiMax DSX-RVD Message
WiMax FPC Message
WiMax FPC Message
WiMax Generic/Type1/Type2 MAC Header Messages
WiMax Generic/Type1/Type2 MAC Header Messages
WiMax PKM-REQ/RSP Messages
WiMax PKM-REQ/RSP Messages
WiMax PMC-REQ/RSP Messages
WiMax PMC-REQ/RSP Messages
WiMax PRC-LT-CTRL Message
WiMax PRC-LT-CTRL Message
WiMax REG-REQ/RSP Messages
WiMax REG-REQ/RSP Messages
WiMax REP-REQ/RSP Messages
WiMax REP-REQ/RSP Messages
WiMax RES-CMD Message
WiMax RES-CMD Message
WiMax RNG-REQ/RSP Messages
WiMax RNG-REQ/RSP Messages
WiMax SBC-REQ/RSP Messages
WiMax SBC-REQ/RSP Messages
WiMax Sub-TLV Messages
WiMax Sub-TLV Messages
Wireless Access Station Session Protocol
Wireless Configuration Service
Wireless Transport Layer Security
Wlan Certificate Extension
World of Warcraft
X Display Manager Control Protocol
X.25
X.29
X.29
X.413 Message Store Service
X.420 File Transfer Body Part
X.501 Directory Operational Binding Management Protocol
X.519 Directory Access Protocol
X.519 Directory Information Shadowing Protocol
X.519 Directory System Protocol
X.880 OSI Remote Operations Service
XCAP Error XML doc (RFC 4825)
XML Configuration Access Protocol Server Capabilities
Xpress Transport Protocol
Xyplex
Yahoo Messenger Protocol
Yellow Pages Bind
Yellow Pages Passwd
Yellow Pages Transfer
ZigBee Application Framework
ZigBee Application Support Layer
ZigBee Device Profile
ZigBee Network Layer
Zipped Inter-ORB Protocol
ZRTP